Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16A0A075B653 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Gm14523-201ENSMUST00000117260 558 ntBASIC15.33■□□□□ 0.04
Trav16A0A075B653 Gm27502-201ENSMUST00000183495 199 ntBASIC15.33■□□□□ 0.04
Trav16A0A075B653 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav16A0A075B653 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.33■□□□□ 0.04
Trav16A0A075B653 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav16A0A075B653 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.32■□□□□ 0.04
Trav16A0A075B653 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav16A0A075B653 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav16A0A075B653 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav16A0A075B653 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav16A0A075B653 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav16A0A075B653 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16A0A075B653 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16A0A075B653 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav16A0A075B653 Gm7332-201ENSMUST00000118351 454 ntBASIC15.3■□□□□ 0.04
Trav16A0A075B653 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav16A0A075B653 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16A0A075B653 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16A0A075B653 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16A0A075B653 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav16A0A075B653 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Gm28536-201ENSMUST00000190971 1317 ntBASIC15.29■□□□□ 0.04
Trav16A0A075B653 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav16A0A075B653 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.28■□□□□ 0.04
Trav16A0A075B653 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.28■□□□□ 0.04
Trav16A0A075B653 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav16A0A075B653 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav16A0A075B653 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16A0A075B653 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16A0A075B653 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav16A0A075B653 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16A0A075B653 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16A0A075B653 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16A0A075B653 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16A0A075B653 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav16A0A075B653 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav16A0A075B653 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Trav16A0A075B653 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav16A0A075B653 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms