Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-7-dv9A0A075B639 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-7-dv9A0A075B639 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.64■□□□□ 0.42
Trav6-7-dv9A0A075B639 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav6-7-dv9A0A075B639 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-7-dv9A0A075B639 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-7-dv9A0A075B639 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav6-7-dv9A0A075B639 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Rps24-207ENSMUST00000224568 714 ntBASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav6-7-dv9A0A075B639 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gm45102-201ENSMUST00000207427 857 ntBASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav6-7-dv9A0A075B639 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav6-7-dv9A0A075B639 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-7-dv9A0A075B639 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.6■□□□□ 0.41
Trav6-7-dv9A0A075B639 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.6■□□□□ 0.41
Trav6-7-dv9A0A075B639 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-7-dv9A0A075B639 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-7-dv9A0A075B639 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-7-dv9A0A075B639 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav6-7-dv9A0A075B639 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-7-dv9A0A075B639 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trav6-7-dv9A0A075B639 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-7-dv9A0A075B639 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-7-dv9A0A075B639 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-7-dv9A0A075B639 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-7-dv9A0A075B639 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.59■□□□□ 0.41
Trav6-7-dv9A0A075B639 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-7-dv9A0A075B639 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav6-7-dv9A0A075B639 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6-7-dv9A0A075B639 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.58■□□□□ 0.41
Trav6-7-dv9A0A075B639 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav6-7-dv9A0A075B639 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav6-7-dv9A0A075B639 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms