Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav7n-4A0A075B620 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav7n-4A0A075B620 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav7n-4A0A075B620 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7n-4A0A075B620 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7n-4A0A075B620 Gm8503-201ENSMUST00000118131 455 ntBASIC15.07■□□□□ 0
Trav7n-4A0A075B620 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7n-4A0A075B620 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav7n-4A0A075B620 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav7n-4A0A075B620 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav7n-4A0A075B620 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7n-4A0A075B620 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7n-4A0A075B620 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav7n-4A0A075B620 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7n-4A0A075B620 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav7n-4A0A075B620 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7n-4A0A075B620 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7n-4A0A075B620 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav7n-4A0A075B620 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav7n-4A0A075B620 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav7n-4A0A075B620 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav7n-4A0A075B620 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7n-4A0A075B620 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7n-4A0A075B620 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav7n-4A0A075B620 Gm11599-201ENSMUST00000118720 878 ntBASIC15.02■□□□□ -0
Trav7n-4A0A075B620 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Gm7432-201ENSMUST00000210343 879 ntBASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav7n-4A0A075B620 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav7n-4A0A075B620 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7n-4A0A075B620 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trav7n-4A0A075B620 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7n-4A0A075B620 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7n-4A0A075B620 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav7n-4A0A075B620 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms