Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav16d-dv11A0A075B617 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav16d-dv11A0A075B617 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav16d-dv11A0A075B617 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav16d-dv11A0A075B617 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav16d-dv11A0A075B617 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav16d-dv11A0A075B617 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav16d-dv11A0A075B617 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav16d-dv11A0A075B617 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav16d-dv11A0A075B617 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav16d-dv11A0A075B617 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16d-dv11A0A075B617 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav16d-dv11A0A075B617 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav16d-dv11A0A075B617 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms