Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trav5-1A0A075B5Z7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav5-1A0A075B5Z7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav5-1A0A075B5Z7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Trav5-1A0A075B5Z7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav5-1A0A075B5Z7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav5-1A0A075B5Z7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav5-1A0A075B5Z7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Trav5-1A0A075B5Z7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Gm26833-201ENSMUST00000180899 440 ntBASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav5-1A0A075B5Z7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav5-1A0A075B5Z7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Trav5-1A0A075B5Z7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.14■□□□□ 0.33
Trav5-1A0A075B5Z7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Trav5-1A0A075B5Z7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trav5-1A0A075B5Z7 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.14■□□□□ 0.33
Trav5-1A0A075B5Z7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav5-1A0A075B5Z7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav5-1A0A075B5Z7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav5-1A0A075B5Z7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav5-1A0A075B5Z7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav5-1A0A075B5Z7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav5-1A0A075B5Z7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Smad6-203ENSMUST00000179458 273 ntBASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Trav5-1A0A075B5Z7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav5-1A0A075B5Z7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trav5-1A0A075B5Z7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav5-1A0A075B5Z7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav5-1A0A075B5Z7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trav5-1A0A075B5Z7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav5-1A0A075B5Z7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav5-1A0A075B5Z7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trav5-1A0A075B5Z7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav5-1A0A075B5Z7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Trav5-1A0A075B5Z7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav5-1A0A075B5Z7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.08■□□□□ 0.32
Trav5-1A0A075B5Z7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav5-1A0A075B5Z7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms