Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm27826-201ENSMUST00000175282 255 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm5976-201ENSMUST00000180794 996 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm38007-201ENSMUST00000192187 313 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm37688-201ENSMUST00000195195 465 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 AC241616.1-201ENSMUST00000213741 166 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 Nsmce2-203ENSMUST00000227173 1122 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Ank3-220ENSMUST00000182439 2586 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Gm42858-201ENSMUST00000202512 1704 ntBASIC9.36□□□□□ -0.91
Scrt1Q99M85 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Scrt1Q99M85 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm13426-201ENSMUST00000117887 795 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm11473-201ENSMUST00000118980 359 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm4917-201ENSMUST00000121452 650 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm25288-201ENSMUST00000122800 265 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm5526-201ENSMUST00000153604 423 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm6216-201ENSMUST00000182390 687 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm18014-201ENSMUST00000183369 817 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm2474-201ENSMUST00000195162 559 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm8768-201ENSMUST00000220020 826 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 AC154461.1-201ENSMUST00000224207 1005 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 AC129217.1-201ENSMUST00000225181 642 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Gm10238-201ENSMUST00000089689 408 ntBASIC9.35□□□□□ -0.91
Scrt1Q99M85 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Scrt1Q99M85 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms