Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm25561-201ENSMUST00000104607 125 ntBASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm13792-201ENSMUST00000121350 423 ntBASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm5501-201ENSMUST00000165917 832 ntBASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm21631-201ENSMUST00000195041 754 ntBASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm19566-201ENSMUST00000199576 610 ntBASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm15599-201ENSMUST00000122283 1345 ntBASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.72□□□□□ -0.69
Smarcd2Q99JR8 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Gm12377-201ENSMUST00000118656 252 ntBASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Gm12489-201ENSMUST00000119364 148 ntBASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Rhox12-203ENSMUST00000183737 761 ntTSL 3 BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Gm29487-201ENSMUST00000190146 256 ntBASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 AC100406.1-201ENSMUST00000217305 480 ntBASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.71□□□□□ -0.69
Smarcd2Q99JR8 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.71□□□□□ -0.7
Smarcd2Q99JR8 Gm45170-201ENSMUST00000206746 1671 ntBASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Gm7190-201ENSMUST00000118669 1452 ntBASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Gstm6-204ENSMUST00000106684 1179 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd2Q99JR8 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms