Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Gm16551-203ENSMUST00000160979 3162 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdhb17Q91VD8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm10997-201ENSMUST00000210294 1500 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm22920-201ENSMUST00000102175 109 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm16200-201ENSMUST00000120385 331 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm7666-201ENSMUST00000146631 819 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm23441-201ENSMUST00000157268 127 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm27163-201ENSMUST00000184767 409 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm28144-201ENSMUST00000188351 699 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm28833-201ENSMUST00000189671 559 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm9729-201ENSMUST00000196364 265 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Mir7686-201ENSMUST00000200604 57 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm43090-201ENSMUST00000202459 314 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm44506-201ENSMUST00000206278 965 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm18907-201ENSMUST00000209719 932 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm18040-201ENSMUST00000217922 827 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm33263-201ENSMUST00000220371 459 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 AC160991.2-201ENSMUST00000223784 1135 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 AC154239.2-201ENSMUST00000227859 233 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm22575-201ENSMUST00000082981 110 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Cep19-201ENSMUST00000042869 1567 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Gm37373-201ENSMUST00000194005 2812 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 AC102431.1-201ENSMUST00000223773 1449 ntBASIC12.03□□□□□ -0.48
Pcdhb17Q91VD8 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 AC079245.1-201ENSMUST00000215680 1454 ntBASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Pcdhb17Q91VD8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms