Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Clrn1Q8K445 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Champ1-201ENSMUST00000051870 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm29101-201ENSMUST00000188329 1471 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm6758-201ENSMUST00000119643 1055 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm14219-201ENSMUST00000120414 288 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm24346-201ENSMUST00000158712 194 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm18733-202ENSMUST00000174447 401 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm22876-201ENSMUST00000175450 298 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Mir3547-201ENSMUST00000175461 88 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm44605-201ENSMUST00000206892 949 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm4903-201ENSMUST00000210462 405 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm8181-201ENSMUST00000062242 669 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Mymk-201ENSMUST00000009358 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm42858-201ENSMUST00000202512 1704 ntBASIC9.99□□□□□ -0.81
Clrn1Q8K445 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Clrn1Q8K445 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Gm5764-201ENSMUST00000118817 885 ntBASIC9.98□□□□□ -0.81
Clrn1Q8K445 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Clrn1Q8K445 Gm42780-201ENSMUST00000197083 734 ntBASIC9.98□□□□□ -0.81
Clrn1Q8K445 Gm7319-201ENSMUST00000210047 778 ntBASIC9.98□□□□□ -0.81
Clrn1Q8K445 Gm45310-201ENSMUST00000210436 275 ntBASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms