Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm15236-201ENSMUST00000117309 379 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm9062-201ENSMUST00000117712 727 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm14231-201ENSMUST00000120090 592 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm15197-201ENSMUST00000120526 478 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm11736-201ENSMUST00000121468 505 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm8022-201ENSMUST00000191763 904 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm37458-201ENSMUST00000194055 410 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm18056-201ENSMUST00000207670 568 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm18061-201ENSMUST00000208350 562 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm18063-201ENSMUST00000208529 568 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm18052-201ENSMUST00000208750 559 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Spcs1-203ENSMUST00000226374 592 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Hmgb4-201ENSMUST00000053830 746 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Supt7l-205ENSMUST00000202421 3056 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm3712-201ENSMUST00000118523 2071 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm9979-201ENSMUST00000069457 3005 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm22582-201ENSMUST00000102283 94 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm25076-201ENSMUST00000104098 132 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm11949-201ENSMUST00000117640 372 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm11801-201ENSMUST00000117807 746 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm19353-201ENSMUST00000184561 445 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm17831-201ENSMUST00000205579 900 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Tmem252-201ENSMUST00000057243 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Enox2-202ENSMUST00000114911 2623 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Lysmd4Q8CC84 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.43□□□□□ -0.9
Lysmd4Q8CC84 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms