Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 AC167565.2-201ENSMUST00000227042 1870 ntBASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Spata33-207ENSMUST00000212760 4074 ntBASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Blnk-202ENSMUST00000117695 1701 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Gm13002-201ENSMUST00000119286 682 ntBASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Gm8425-201ENSMUST00000171395 769 ntBASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 AC157931.1-201ENSMUST00000198565 346 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Gm34105-201ENSMUST00000214812 571 ntTSL 5 BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 AC166061.1-201ENSMUST00000225163 1138 ntBASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.27□□□□□ -0.45
Nup98Q6PFD9 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nup98Q6PFD9 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Arhgef9-204ENSMUST00000113882 2445 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm14239-201ENSMUST00000116491 685 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm7799-201ENSMUST00000133080 476 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm25154-201ENSMUST00000157123 119 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm24180-201ENSMUST00000179961 110 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm27953-201ENSMUST00000185171 143 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 AC153153.1-201ENSMUST00000225803 793 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Ang2-202ENSMUST00000228835 896 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm16477-201ENSMUST00000085365 801 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Mir341-201ENSMUST00000093593 96 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm17415-201ENSMUST00000096427 789 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 2900011O08Rik-201ENSMUST00000056521 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 AC126459.1-201ENSMUST00000214791 2123 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm42651-201ENSMUST00000199851 1339 ntBASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nup98Q6PFD9 Gm44664-201ENSMUST00000206841 1786 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 2310026L22Rik-201ENSMUST00000146658 400 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Mir3091-201ENSMUST00000175086 76 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Fam240a-201ENSMUST00000177678 499 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm37144-201ENSMUST00000195445 1150 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Gm9273-201ENSMUST00000200606 715 ntBASIC12.25□□□□□ -0.45
Nup98Q6PFD9 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms