Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Pde4d-209ENSMUST00000122041 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim43aQ3TL54 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm8197-202ENSMUST00000193422 934 ntBASIC11.21□□□□□ -0.61
Trim43aQ3TL54 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.21□□□□□ -0.61
Trim43aQ3TL54 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm25580-201ENSMUST00000083409 327 ntBASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trim43aQ3TL54 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 1700010I14Rik-203ENSMUST00000151609 1853 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Cyp2e1-201ENSMUST00000026552 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trim43aQ3TL54 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gm43633-201ENSMUST00000202455 2330 ntBASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gsdmc3-203ENSMUST00000190682 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gm11952-201ENSMUST00000121172 821 ntBASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gm42518-201ENSMUST00000196277 938 ntBASIC11.2□□□□□ -0.62
Trim43aQ3TL54 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Id2-203ENSMUST00000222667 958 ntBASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Acta2-201ENSMUST00000039631 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trim43aQ3TL54 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms