Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Ebf1Q07802 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 AC166361.2-201ENSMUST00000219269 1415 ntBASIC10.82□□□□□ -0.68
Ebf1Q07802 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.82□□□□□ -0.68
Ebf1Q07802 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ebf1Q07802 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm13700-201ENSMUST00000118624 1128 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm24140-201ENSMUST00000122773 326 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm23582-201ENSMUST00000158530 139 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm6291-201ENSMUST00000179994 309 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm7430-201ENSMUST00000193824 1144 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm38349-201ENSMUST00000195732 462 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 CT030035.1-201ENSMUST00000223964 935 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 BX649293.1-201ENSMUST00000227437 631 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 AC103672.1-201ENSMUST00000227502 365 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Ebf1Q07802 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ebf1Q07802 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ebf1Q07802 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.81□□□□□ -0.68
Ebf1Q07802 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.8□□□□□ -0.68
Ebf1Q07802 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Ebf1Q07802 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ebf1Q07802 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.8□□□□□ -0.68
Ebf1Q07802 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms