Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Ccdc141-203ENSMUST00000111833 631 ntTSL 2 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm14983-201ENSMUST00000121551 323 ntBASIC13.14□□□□□ -0.31
Cacna1sQ02789 Cd209b-203ENSMUST00000171635 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm29372-201ENSMUST00000191416 364 ntBASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm43674-201ENSMUST00000196313 791 ntBASIC13.14□□□□□ -0.31
Cacna1sQ02789 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm18129-201ENSMUST00000208834 1044 ntBASIC13.14□□□□□ -0.31
Cacna1sQ02789 AC159244.2-201ENSMUST00000222051 220 ntTSL 3 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 AC068459.1-201ENSMUST00000222492 905 ntTSL 3 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 AC154548.2-201ENSMUST00000224621 469 ntBASIC13.14□□□□□ -0.31
Cacna1sQ02789 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Cib3-201ENSMUST00000098630 585 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Serpina10-202ENSMUST00000121625 1424 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Rsrc2-208ENSMUST00000182309 1595 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm20953-201ENSMUST00000216399 2614 ntBASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.14□□□□□ -0.31
Cacna1sQ02789 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Taz-213ENSMUST00000135504 747 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm13713-201ENSMUST00000139377 703 ntTSL 3 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm15788-202ENSMUST00000140087 751 ntTSL 3 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm13713-202ENSMUST00000155472 285 ntTSL 5 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm42402-201ENSMUST00000208341 1054 ntBASIC13.14□□□□□ -0.31
Cacna1sQ02789 AC126939.2-201ENSMUST00000225989 307 ntBASIC13.14□□□□□ -0.31
Cacna1sQ02789 Sell-202ENSMUST00000097491 1215 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cacna1sQ02789 Gm43827-201ENSMUST00000200623 1390 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Tmigd1-201ENSMUST00000072633 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Brd9-206ENSMUST00000222399 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm14239-201ENSMUST00000116491 685 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm13542-201ENSMUST00000118484 637 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm6341-201ENSMUST00000119683 411 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm8425-201ENSMUST00000171395 769 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm25687-201ENSMUST00000175442 241 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm5561-201ENSMUST00000178932 480 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Cryaa-206ENSMUST00000228716 1117 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm33858-201ENSMUST00000216918 1411 ntTSL 5 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm42589-201ENSMUST00000199097 1751 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm28905-202ENSMUST00000219328 1377 ntTSL 5 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 6330415B21Rik-201ENSMUST00000204215 2200 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Zfp133-ps-201ENSMUST00000119058 1802 ntBASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cacna1sQ02789 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gm12168-201ENSMUST00000119051 368 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gm31363-201ENSMUST00000199362 541 ntTSL 3 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 AC165159.1-201ENSMUST00000223825 631 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 Ctsw-201ENSMUST00000025844 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Tex43-201ENSMUST00000035640 565 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 AC122858.2-201ENSMUST00000228571 1362 ntBASIC13.12□□□□□ -0.31
Cacna1sQ02789 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Scnn1a-207ENSMUST00000177329 2807 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Gtf2f2-201ENSMUST00000088922 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cacna1sQ02789 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms