Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC8.55□□□□□ -1.04
Lmo4P61969 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Gm11929-201ENSMUST00000118175 945 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm15032-201ENSMUST00000118547 411 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm11473-201ENSMUST00000118980 359 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm6630-201ENSMUST00000119199 454 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm15815-201ENSMUST00000120569 255 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm13792-201ENSMUST00000121350 423 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm15793-201ENSMUST00000121857 495 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC8.55□□□□□ -1.04
Lmo4P61969 Gm28391-201ENSMUST00000185202 379 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm29528-201ENSMUST00000186699 379 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm29526-201ENSMUST00000187217 379 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Gm37390-201ENSMUST00000192452 872 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm42511-201ENSMUST00000196160 234 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC8.55□□□□□ -1.04
Lmo4P61969 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Gm18164-201ENSMUST00000213769 927 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Gm18166-201ENSMUST00000215557 927 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 AC100406.1-201ENSMUST00000217305 480 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Lmo4P61969 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Lmo4P61969 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 AC154186.1-201ENSMUST00000227711 1597 ntBASIC8.55□□□□□ -1.04
Lmo4P61969 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC8.55□□□□□ -1.04
Lmo4P61969 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Lmo4P61969 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Lmo4P61969 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Lmo4P61969 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Lmo4P61969 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Lmo4P61969 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Lmo4P61969 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Lmo4P61969 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Lmo4P61969 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 AC130671.3-201ENSMUST00000227393 1897 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Galntl5-202ENSMUST00000114965 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC8.54□□□□□ -1.04
Lmo4P61969 Gm6500-201ENSMUST00000119412 451 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Mir1896-201ENSMUST00000122641 81 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Gm16305-201ENSMUST00000140747 556 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC8.54□□□□□ -1.04
Lmo4P61969 Gm23081-201ENSMUST00000157845 297 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC8.54□□□□□ -1.04
Lmo4P61969 Gm8707-201ENSMUST00000183325 980 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Gm37232-201ENSMUST00000194887 367 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC8.54□□□□□ -1.04
Lmo4P61969 Gm43726-201ENSMUST00000199110 775 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Lmo4P61969 Gm6008-201ENSMUST00000206542 874 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC8.54□□□□□ -1.04
Lmo4P61969 Gm18256-201ENSMUST00000209087 907 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Gm5040-201ENSMUST00000218609 800 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Lmo4P61969 AC163638.2-201ENSMUST00000224920 827 ntBASIC8.54□□□□□ -1.04
Lmo4P61969 AC107711.3-201ENSMUST00000228939 1035 ntBASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms