Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Pdx1P52946 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.47□□□□□ -0.73
Pdx1P52946 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Pdx1P52946 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Pdx1P52946 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Gm12947-201ENSMUST00000116114 420 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 Gm12397-201ENSMUST00000117674 615 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 Gm15196-201ENSMUST00000121406 482 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Rn7s6-201ENSMUST00000175005 291 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 Gm4430-202ENSMUST00000193902 1041 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Gm19566-201ENSMUST00000199576 610 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 Gm45310-201ENSMUST00000210436 275 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Pdx1P52946 AC174797.2-202ENSMUST00000225729 568 ntBASIC10.46□□□□□ -0.73
Pdx1P52946 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Pdx1P52946 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Gm13169-201ENSMUST00000122090 1459 ntBASIC10.46□□□□□ -0.74
Pdx1P52946 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Pdx1P52946 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.46□□□□□ -0.74
Pdx1P52946 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.46□□□□□ -0.74
Pdx1P52946 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.46□□□□□ -0.74
Pdx1P52946 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Pdx1P52946 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.46□□□□□ -0.74
Pdx1P52946 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Pdx1P52946 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Pdx1P52946 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.45□□□□□ -0.74
Pdx1P52946 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm23612-201ENSMUST00000103823 110 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm13022-201ENSMUST00000121181 285 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Gm16397-201ENSMUST00000122201 494 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Gm16441-201ENSMUST00000138176 924 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm6038-201ENSMUST00000154310 948 ntBASIC10.45□□□□□ -0.74
Pdx1P52946 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pdx1P52946 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Pdx1P52946 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 105.4 ms