Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Nedd8P29595 Gm28224-201ENSMUST00000186078 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm29001-201ENSMUST00000186177 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC9.65□□□□□ -0.86
Nedd8P29595 Gm28292-201ENSMUST00000186593 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm28101-201ENSMUST00000187608 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm29076-201ENSMUST00000187689 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm28302-201ENSMUST00000187931 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm28646-201ENSMUST00000188220 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm28205-201ENSMUST00000189177 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm29032-201ENSMUST00000189797 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm28695-201ENSMUST00000190300 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm37448-201ENSMUST00000192795 697 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm37284-201ENSMUST00000193607 539 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Gm18038-201ENSMUST00000197900 485 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nedd8P29595 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.65□□□□□ -0.86
Nedd8P29595 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.65□□□□□ -0.86
Nedd8P29595 5430437J10Rik-202ENSMUST00000227355 634 ntBASIC9.65□□□□□ -0.86
Nedd8P29595 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nedd8P29595 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nedd8P29595 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nedd8P29595 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nedd8P29595 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nedd8P29595 Scml2-202ENSMUST00000074802 3440 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Nedd8P29595 Glb1l2-202ENSMUST00000066560 3688 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nedd8P29595 Mgat4a-202ENSMUST00000143636 1802 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nedd8P29595 4933416O17Rik-201ENSMUST00000220972 2122 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Nedd8P29595 Gm5114-201ENSMUST00000108017 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Nedd8P29595 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Nedd8P29595 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nedd8P29595 Adamtsl3-203ENSMUST00000173287 7249 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Nedd8P29595 Catsperd-201ENSMUST00000112979 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nedd8P29595 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
Nedd8P29595 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Nedd8P29595 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Arhgap28-203ENSMUST00000164647 2754 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC9.64□□□□□ -0.87
Nedd8P29595 Arhgef10l-204ENSMUST00000105797 3507 ntTSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm16059-201ENSMUST00000135583 3778 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Unc13d-202ENSMUST00000106450 4046 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.64□□□□□ -0.87
Nedd8P29595 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Uqcc1-204ENSMUST00000109636 2633 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 B3gntl1-202ENSMUST00000067399 2864 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Ryr1-201ENSMUST00000032813 15352 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm16518-201ENSMUST00000117960 508 ntBASIC9.64□□□□□ -0.87
Nedd8P29595 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Ighv5-7-201ENSMUST00000192302 244 ntBASIC9.64□□□□□ -0.87
Nedd8P29595 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Olfr284-202ENSMUST00000206647 966 ntBASIC9.64□□□□□ -0.87
Nedd8P29595 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm45880-201ENSMUST00000213041 853 ntBASIC9.64□□□□□ -0.87
Nedd8P29595 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.64□□□□□ -0.87
Nedd8P29595 AC123665.1-201ENSMUST00000228204 438 ntBASIC9.64□□□□□ -0.87
Nedd8P29595 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC9.64□□□□□ -0.87
Nedd8P29595 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Pcdhb12-201ENSMUST00000055495 3034 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm9866-205ENSMUST00000220998 1973 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.64□□□□□ -0.87
Nedd8P29595 Txndc16-209ENSMUST00000153383 3691 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Trpm1-202ENSMUST00000177102 2928 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 Nctc1-202ENSMUST00000132167 2104 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Gm28988-201ENSMUST00000191363 1897 ntTSL 5 BASIC9.64□□□□□ -0.87
Nedd8P29595 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Nedd8P29595 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.63□□□□□ -0.87
Nedd8P29595 Gpr68-203ENSMUST00000110066 3223 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
Nedd8P29595 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Cdca2-205ENSMUST00000150006 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Nedd8P29595 Aox2-201ENSMUST00000114366 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms