Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxd8P23463 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hoxd8P23463 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxd8P23463 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxd8P23463 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxd8P23463 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Hoxd8P23463 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxd8P23463 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Hoxd8P23463 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm12470-201ENSMUST00000117239 1049 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm16228-201ENSMUST00000162286 809 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Mir7088-201ENSMUST00000184227 86 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm8226-201ENSMUST00000190511 798 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm38103-201ENSMUST00000191707 864 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm37490-201ENSMUST00000195566 724 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm29755-201ENSMUST00000196976 948 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm42780-201ENSMUST00000197083 734 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm19798-201ENSMUST00000201502 457 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Hoxd8P23463 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxd8P23463 CT010480.1-201ENSMUST00000223612 363 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 AC149294.3-201ENSMUST00000226888 732 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.11□□□□□ -0.63
Hoxd8P23463 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxd8P23463 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxd8P23463 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Hoxd8P23463 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm45832-201ENSMUST00000212762 1443 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxd8P23463 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Hoxd8P23463 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxd8P23463 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm9095-201ENSMUST00000117607 881 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm9097-201ENSMUST00000120514 880 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm14639-201ENSMUST00000120850 866 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm14176-201ENSMUST00000121302 477 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxd8P23463 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm9499-201ENSMUST00000180888 964 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm8525-201ENSMUST00000189674 861 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm37597-201ENSMUST00000191853 382 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm37355-201ENSMUST00000193345 606 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm43761-201ENSMUST00000202132 991 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm45308-201ENSMUST00000210610 415 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hoxd8P23463 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxd8P23463 AC103672.1-201ENSMUST00000227502 365 ntBASIC11.1□□□□□ -0.63
Hoxd8P23463 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms