Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Pdlim5-204ENSMUST00000168967 1755 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
P20040 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
P20040 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Dync1h1-201ENSMUST00000018851 14342 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
P20040 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
P20040 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Gm42031-201ENSMUST00000209823 1885 ntTSL 5 BASIC9.4□□□□□ -0.9
P20040 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.4□□□□□ -0.9
P20040 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.4□□□□□ -0.9
P20040 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
P20040 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.4□□□□□ -0.9
P20040 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
P20040 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
P20040 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC9.4□□□□□ -0.9
P20040 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
P20040 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
P20040 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
P20040 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.4□□□□□ -0.9
P20040 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.4□□□□□ -0.9
P20040 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
P20040 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.4□□□□□ -0.9
P20040 Gm37028-201ENSMUST00000194276 107 ntBASIC9.4□□□□□ -0.9
P20040 Gm9884-201ENSMUST00000194343 1222 ntBASIC9.4□□□□□ -0.9
P20040 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.4□□□□□ -0.9
P20040 Gm45592-201ENSMUST00000209605 1043 ntBASIC9.4□□□□□ -0.9
P20040 Gm45410-201ENSMUST00000211331 1093 ntBASIC9.4□□□□□ -0.9
P20040 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Gm4811-201ENSMUST00000220879 1220 ntBASIC9.4□□□□□ -0.9
P20040 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.4□□□□□ -0.9
P20040 AC129308.3-201ENSMUST00000225652 524 ntBASIC9.4□□□□□ -0.9
P20040 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Casz1-201ENSMUST00000094464 4349 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
P20040 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P20040 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
P20040 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P20040 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P20040 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P20040 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.4□□□□□ -0.91
P20040 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P20040 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P20040 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
P20040 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
P20040 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.91
P20040 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Arhgap17-202ENSMUST00000106442 3336 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
P20040 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
P20040 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
P20040 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.39□□□□□ -0.91
P20040 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC9.39□□□□□ -0.91
P20040 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Gm13126-201ENSMUST00000117079 3063 ntBASIC9.39□□□□□ -0.91
P20040 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC9.39□□□□□ -0.91
P20040 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
P20040 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
P20040 Gm11422-201ENSMUST00000118925 1103 ntBASIC9.39□□□□□ -0.91
P20040 Gm13668-201ENSMUST00000119237 1001 ntBASIC9.39□□□□□ -0.91
P20040 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.39□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms