Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Gm43340-201ENSMUST00000200448 1344 ntBASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Gp1ba-201ENSMUST00000055184 2710 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Mkln1os-201ENSMUST00000139185 1864 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Gm27483-201ENSMUST00000184983 71 ntBASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 AC153948.2-201ENSMUST00000218112 505 ntBASIC9.08□□□□□ -0.96
Dchs1E9PVD3 CT025689.5-201ENSMUST00000224316 986 ntBASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Cdca8-201ENSMUST00000030690 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Kif23-201ENSMUST00000034815 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Gm23497-201ENSMUST00000157738 130 ntBASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Gm7251-201ENSMUST00000182661 1009 ntBASIC9.08□□□□□ -0.96
Dchs1E9PVD3 1700102F20Rik-201ENSMUST00000203859 670 ntBASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Rpl21-ps2-201ENSMUST00000222933 481 ntBASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Dchs1E9PVD3 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm16518-201ENSMUST00000117960 508 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm20945-201ENSMUST00000178122 1145 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Atp5h-208ENSMUST00000180072 486 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm10250-201ENSMUST00000090488 482 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm42589-201ENSMUST00000199097 1751 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm11701-201ENSMUST00000121277 1142 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm3687-201ENSMUST00000161710 460 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Colq-205ENSMUST00000150054 2867 ntTSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 AC134898.1-201ENSMUST00000223738 1836 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Pex12-201ENSMUST00000018877 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm24300-201ENSMUST00000177809 109 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm24017-201ENSMUST00000178726 109 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm23952-201ENSMUST00000179380 109 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Tmx2-202ENSMUST00000111664 1926 ntTSL 3 BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Dchs1E9PVD3 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms