Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm25144-201ENSMUST00000179561 110 ntBASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm25352-201ENSMUST00000179815 110 ntBASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm28659-201ENSMUST00000188013 759 ntBASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 AC152922.1-201ENSMUST00000216518 1232 ntBASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 AC153512.3-201ENSMUST00000220426 662 ntTSL 3 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm19557-201ENSMUST00000182109 2765 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 AC153955.4-201ENSMUST00000217069 2752 ntBASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Hsd17b13-201ENSMUST00000048118 1708 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Uba1-202ENSMUST00000089217 4044 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm18222-201ENSMUST00000202416 1387 ntBASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm4864-201ENSMUST00000219894 1461 ntBASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Slc7a8-201ENSMUST00000022787 4084 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Ncaph2-202ENSMUST00000074552 3299 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Clec4f-201ENSMUST00000014686 2471 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gna14-201ENSMUST00000025602 3383 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Dtnbos-201ENSMUST00000173847 1662 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm42549-201ENSMUST00000202392 7004 ntBASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm6185-202ENSMUST00000212885 2692 ntTSL 5 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm10069-201ENSMUST00000144745 3694 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm43099-201ENSMUST00000198943 5241 ntBASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Grb10-203ENSMUST00000109654 4755 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm43766-201ENSMUST00000200590 5417 ntBASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Tfdp1-203ENSMUST00000209396 2421 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Adtrp-201ENSMUST00000072012 2440 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm7061-201ENSMUST00000118127 1416 ntBASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm42822-201ENSMUST00000200507 1529 ntBASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Wdr61-202ENSMUST00000118771 3372 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Prn-202ENSMUST00000136783 3370 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Pidd1-201ENSMUST00000026580 3357 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Spdye4b-201ENSMUST00000031574 2165 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm44815-201ENSMUST00000206812 1633 ntBASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Slc30a2-202ENSMUST00000105872 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Prkar2b-203ENSMUST00000146865 3133 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm16023-201ENSMUST00000137752 2490 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Ints10-202ENSMUST00000070713 4192 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm37057-201ENSMUST00000192624 1916 ntBASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm12363-201ENSMUST00000122250 668 ntBASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Gm3880A0A1B0GSB3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms