Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Gm12613-201ENSMUST00000180323 382 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm18827-201ENSMUST00000188341 790 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm42657-201ENSMUST00000201746 211 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm43947-201ENSMUST00000203019 959 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm33080-201ENSMUST00000205429 172 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm45770-201ENSMUST00000212105 616 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm8162-201ENSMUST00000213951 665 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 AC154435.1-201ENSMUST00000223938 959 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 AC154305.2-201ENSMUST00000225813 901 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 AC135469.1-201ENSMUST00000225984 772 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 AC099645.1-201ENSMUST00000226476 1105 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm44999-201ENSMUST00000207456 1493 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Adam22-204ENSMUST00000088761 9077 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Gm3550W4VSN7 Gm18294-201ENSMUST00000176980 1748 ntBASIC9□□□□□ -0.97
Gm3550W4VSN7 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Gm3550W4VSN7 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm44106-201ENSMUST00000203153 1599 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm44062-201ENSMUST00000203312 4857 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm43143-201ENSMUST00000196083 2023 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Mir453-201ENSMUST00000104732 82 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm12389-201ENSMUST00000117696 418 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm16518-201ENSMUST00000117960 508 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm5244-201ENSMUST00000164001 339 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm4812-201ENSMUST00000182847 993 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm44814-201ENSMUST00000207018 434 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 AC165154.1-201ENSMUST00000226661 340 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm14267-206ENSMUST00000226870 1209 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 AC136376.2-201ENSMUST00000228819 490 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Gm7967-202ENSMUST00000191042 5042 ntBASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Gm3550W4VSN7 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms