Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 2210010C04Rik-201ENSMUST00000031931 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 A630052C17Rik-201ENSMUST00000129876 2203 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Ift172-201ENSMUST00000041565 5403 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm14058-201ENSMUST00000116082 735 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Rn7s1-201ENSMUST00000174924 300 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Rn7s2-201ENSMUST00000175032 300 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm26461-201ENSMUST00000175064 290 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm37852-201ENSMUST00000193027 350 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm6905-201ENSMUST00000205729 511 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm19091-201ENSMUST00000208120 978 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 AC166344.1-201ENSMUST00000223745 674 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Abcc3-206ENSMUST00000178136 5005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm14667-201ENSMUST00000119448 1350 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Lmo3-207ENSMUST00000163065 2425 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Trim13Q9CYB0 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 AC154352.1-201ENSMUST00000221477 2365 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Bcl9-207ENSMUST00000166341 4652 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 2900060N12Rik-201ENSMUST00000221412 3721 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm45124-201ENSMUST00000206723 2755 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Clcn1-201ENSMUST00000031894 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm12136-201ENSMUST00000120460 1209 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm14395-201ENSMUST00000120494 563 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm4812-201ENSMUST00000182847 993 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm44270-201ENSMUST00000203084 1234 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm7848-201ENSMUST00000210739 718 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm18042-201ENSMUST00000219887 790 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Trim13Q9CYB0 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.82□□□□□ -0.84
Trim13Q9CYB0 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms