Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Vps50Q8CI71 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Hsd3b5-201ENSMUST00000044094 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.49□□□□□ -0.73
Vps50Q8CI71 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Gm4993-201ENSMUST00000118719 1174 ntBASIC10.49□□□□□ -0.73
Vps50Q8CI71 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.49□□□□□ -0.73
Vps50Q8CI71 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Gm43163-201ENSMUST00000196571 442 ntBASIC10.49□□□□□ -0.73
Vps50Q8CI71 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.49□□□□□ -0.73
Vps50Q8CI71 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.49□□□□□ -0.73
Vps50Q8CI71 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.49□□□□□ -0.73
Vps50Q8CI71 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Vps50Q8CI71 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Prkcd-208ENSMUST00000112211 2851 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm15197-201ENSMUST00000120526 478 ntBASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm13937-201ENSMUST00000121000 988 ntBASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm12628-201ENSMUST00000122193 382 ntBASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm3671-201ENSMUST00000182463 1007 ntBASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm28833-201ENSMUST00000189671 559 ntBASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm43380-201ENSMUST00000200421 220 ntBASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm43671-201ENSMUST00000200422 433 ntBASIC10.48□□□□□ -0.73
Vps50Q8CI71 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.48□□□□□ -0.73
Vps50Q8CI71 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.48□□□□□ -0.73
Vps50Q8CI71 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Vps50Q8CI71 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms