Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Tnfrsf8-201ENSMUST00000030339 3414 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gm4909-201ENSMUST00000118749 794 ntBASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Recql5os1-201ENSMUST00000134391 396 ntTSL 5 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gm29199-201ENSMUST00000187766 775 ntBASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gm5881-201ENSMUST00000204737 367 ntBASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gm21998-201ENSMUST00000117552 1308 ntBASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Lysmd4Q8CC84 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Lysmd4Q8CC84 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gm12165-201ENSMUST00000117047 342 ntBASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gm43163-201ENSMUST00000196571 442 ntBASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gm44304-201ENSMUST00000200509 145 ntBASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gm42710-201ENSMUST00000200608 985 ntBASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 CT025645.2-201ENSMUST00000223278 3827 ntBASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gm10263-201ENSMUST00000085163 300 ntBASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Mtbp-201ENSMUST00000022998 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 AC154575.1-201ENSMUST00000227166 1474 ntBASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Lysmd4Q8CC84 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm26668-201ENSMUST00000181125 3635 ntTSL 5 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Hspd1-ps3-201ENSMUST00000119713 1722 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Gm46218-202ENSMUST00000215520 1956 ntBASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Lysmd4Q8CC84 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms