Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 AC022682.1-201ENSMUST00000224624 2023 ntBASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdh19Q80TF3 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pcdh19Q80TF3 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Pcdh19Q80TF3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.52□□□□□ -0.72
Pcdh19Q80TF3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pcdh19Q80TF3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pcdh19Q80TF3 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
Pcdh19Q80TF3 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pcdh19Q80TF3 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pcdh19Q80TF3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm13047-201ENSMUST00000117116 815 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm11919-201ENSMUST00000117609 721 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm12570-201ENSMUST00000122047 1030 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Mir6923-201ENSMUST00000184592 72 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm43547-201ENSMUST00000197729 328 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm7902-201ENSMUST00000198842 947 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 AC102542.1-201ENSMUST00000225204 1138 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 AC149588.2-201ENSMUST00000228182 1859 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Cdkl2-202ENSMUST00000086978 4066 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdh19Q80TF3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 L1cam-203ENSMUST00000114430 5126 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gm25226-201ENSMUST00000158198 123 ntBASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gm7539-201ENSMUST00000189789 630 ntBASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gm37782-201ENSMUST00000194879 678 ntBASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gm8679-201ENSMUST00000210651 1036 ntBASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gm7192-201ENSMUST00000210793 1137 ntBASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdh19Q80TF3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms