Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nup98Q6PFD9 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Gm43817-201ENSMUST00000196459 2262 ntBASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Ighv6-3-201ENSMUST00000103486 356 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Ighv6-6-201ENSMUST00000103489 357 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Gm9075-201ENSMUST00000168738 794 ntBASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Gm7583-201ENSMUST00000182941 1005 ntBASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Nos2-203ENSMUST00000214397 3429 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nup98Q6PFD9 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm6225-201ENSMUST00000181558 1700 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm38309-201ENSMUST00000192063 1518 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm5130-201ENSMUST00000210233 959 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm45780-201ENSMUST00000212089 224 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm36287-201ENSMUST00000223481 796 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 AC154643.1-201ENSMUST00000225643 625 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm23458-201ENSMUST00000083257 169 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Mgst2-201ENSMUST00000099106 603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm37583-201ENSMUST00000195460 2487 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm42879-201ENSMUST00000198656 2214 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Gm44933-201ENSMUST00000208637 1987 ntTSL 5 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 4930470P17Rik-201ENSMUST00000062355 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nup98Q6PFD9 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Gm36980-201ENSMUST00000195643 622 ntBASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Gm44173-201ENSMUST00000204316 132 ntBASIC12.27□□□□□ -0.44
Nup98Q6PFD9 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Gm6684-201ENSMUST00000053717 685 ntBASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Gm37975-201ENSMUST00000195494 2099 ntBASIC12.27□□□□□ -0.44
Nup98Q6PFD9 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nup98Q6PFD9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms