Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 Gm44741-201ENSMUST00000207503 2127 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Zfp936-203ENSMUST00000202535 3112 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Gm26773-201ENSMUST00000180772 2868 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Eif4e2-201ENSMUST00000050876 2869 ntTSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Npas1P97459 Gm4294-201ENSMUST00000105169 614 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC8.86□□□□□ -0.99
Npas1P97459 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 Gm15198-201ENSMUST00000117283 177 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Gm13350-201ENSMUST00000120519 479 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC8.86□□□□□ -0.99
Npas1P97459 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC8.86□□□□□ -0.99
Npas1P97459 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Gm19246-201ENSMUST00000173599 255 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Gm18367-201ENSMUST00000176139 600 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Gm23694-201ENSMUST00000179335 110 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC8.86□□□□□ -0.99
Npas1P97459 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Gm7741-201ENSMUST00000181445 989 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC8.86□□□□□ -0.99
Npas1P97459 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC8.86□□□□□ -0.99
Npas1P97459 AC107638.1-201ENSMUST00000213690 1061 ntBASIC8.86□□□□□ -0.99
Npas1P97459 AC154319.1-201ENSMUST00000216330 312 ntBASIC8.86□□□□□ -0.99
Npas1P97459 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC8.86□□□□□ -0.99
Npas1P97459 AL589735.1-201ENSMUST00000224353 270 ntBASIC8.86□□□□□ -0.99
Npas1P97459 AC134860.1-201ENSMUST00000224867 660 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Npas1P97459 Gm21811-201ENSMUST00000096485 930 ntBASIC8.86□□□□□ -0.99
Npas1P97459 H2-Eb2-201ENSMUST00000050325 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Fndc7-202ENSMUST00000102620 3477 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Gm38148-201ENSMUST00000195166 3012 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 AC124561.1-202ENSMUST00000228652 1929 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Pds5a-201ENSMUST00000031104 4146 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 Gm9915-201ENSMUST00000066196 1383 ntBASIC8.86□□□□□ -0.99
Npas1P97459 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Npas1P97459 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC8.86□□□□□ -0.99
Npas1P97459 Glp2r-201ENSMUST00000021289 1738 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Gm21142-201ENSMUST00000179999 2604 ntBASIC8.85□□□□□ -0.99
Npas1P97459 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Col19a1-201ENSMUST00000051344 3336 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Rpp14-201ENSMUST00000023924 2401 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Npas1P97459 Gm12059-201ENSMUST00000128996 3105 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Npas1P97459 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Atg13-201ENSMUST00000028678 3604 ntTSL 5 BASIC8.85□□□□□ -0.99
Npas1P97459 Utp15-201ENSMUST00000040972 4120 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC8.85□□□□□ -0.99
Npas1P97459 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC8.85□□□□□ -0.99
Npas1P97459 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC8.85□□□□□ -0.99
Npas1P97459 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC8.85□□□□□ -0.99
Npas1P97459 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC8.85□□□□□ -0.99
Npas1P97459 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC8.85□□□□□ -0.99
Npas1P97459 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC8.85□□□□□ -0.99
Npas1P97459 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC8.85□□□□□ -0.99
Npas1P97459 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC8.85□□□□□ -0.99
Npas1P97459 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Npas1P97459 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Npas1P97459 Gm29499-201ENSMUST00000189151 486 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms