Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.82□□□□□ -0.68
Ddx6P54823 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm28179-201ENSMUST00000188365 613 ntBASIC10.82□□□□□ -0.68
Ddx6P54823 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm29157-201ENSMUST00000188753 612 ntBASIC10.82□□□□□ -0.68
Ddx6P54823 Gm8226-201ENSMUST00000190511 798 ntBASIC10.82□□□□□ -0.68
Ddx6P54823 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC10.82□□□□□ -0.68
Ddx6P54823 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.82□□□□□ -0.68
Ddx6P54823 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm6426-201ENSMUST00000209048 854 ntBASIC10.82□□□□□ -0.68
Ddx6P54823 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.82□□□□□ -0.68
Ddx6P54823 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.82□□□□□ -0.68
Ddx6P54823 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.82□□□□□ -0.68
Ddx6P54823 AC102523.1-201ENSMUST00000228706 1144 ntBASIC10.82□□□□□ -0.68
Ddx6P54823 Gm8730-201ENSMUST00000076373 954 ntBASIC10.82□□□□□ -0.68
Ddx6P54823 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ddx6P54823 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Ddx6P54823 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.82□□□□□ -0.68
Ddx6P54823 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Ddx6P54823 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Ddx6P54823 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Ddx6P54823 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Ddx6P54823 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ddx6P54823 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC10.81□□□□□ -0.68
Ddx6P54823 AC154197.1-201ENSMUST00000225136 1382 ntBASIC10.81□□□□□ -0.68
Ddx6P54823 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ddx6P54823 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ddx6P54823 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.81□□□□□ -0.68
Ddx6P54823 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC10.81□□□□□ -0.68
Ddx6P54823 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC10.81□□□□□ -0.68
Ddx6P54823 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC10.81□□□□□ -0.68
Ddx6P54823 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.81□□□□□ -0.68
Ddx6P54823 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC10.81□□□□□ -0.68
Ddx6P54823 Gm8707-201ENSMUST00000183325 980 ntBASIC10.81□□□□□ -0.68
Ddx6P54823 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ddx6P54823 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Ddx6P54823 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.81□□□□□ -0.68
Ddx6P54823 Gm7904-201ENSMUST00000217049 465 ntBASIC10.81□□□□□ -0.68
Ddx6P54823 Gm19090-201ENSMUST00000218187 774 ntBASIC10.81□□□□□ -0.68
Ddx6P54823 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC10.81□□□□□ -0.68
Ddx6P54823 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC10.81□□□□□ -0.68
Ddx6P54823 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.81□□□□□ -0.68
Ddx6P54823 AC165092.1-201ENSMUST00000224018 486 ntBASIC10.81□□□□□ -0.68
Ddx6P54823 AC134860.5-201ENSMUST00000225071 1249 ntBASIC10.81□□□□□ -0.68
Ddx6P54823 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ddx6P54823 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Ddx6P54823 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC10.81□□□□□ -0.68
Ddx6P54823 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.81□□□□□ -0.68
Ddx6P54823 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Ddx6P54823 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Ddx6P54823 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms