Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Atxn1P54254 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.62□□□□□ -0.71
Atxn1P54254 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.62□□□□□ -0.71
Atxn1P54254 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Ighv13-1-201ENSMUST00000103480 294 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 Gm4917-201ENSMUST00000121452 650 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC10.62□□□□□ -0.71
Atxn1P54254 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Gm19246-201ENSMUST00000173599 255 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 Gm28671-201ENSMUST00000187036 692 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 Gm3137-201ENSMUST00000218177 620 ntTSL 3 BASIC10.62□□□□□ -0.71
Atxn1P54254 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.62□□□□□ -0.71
Atxn1P54254 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 CT009550.1-201ENSMUST00000225750 864 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.62□□□□□ -0.71
Atxn1P54254 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Atxn1P54254 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Atxn1P54254 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC10.61□□□□□ -0.71
Atxn1P54254 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Atxn1P54254 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm14997-201ENSMUST00000119232 636 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Gm14227-201ENSMUST00000119431 629 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Gm14639-201ENSMUST00000120850 866 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Gm16288-201ENSMUST00000137940 367 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.61□□□□□ -0.71
Atxn1P54254 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Atxn1P54254 Ighv5-1-201ENSMUST00000193324 353 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm7815-201ENSMUST00000196104 832 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC10.61□□□□□ -0.71
Atxn1P54254 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Gm9619-201ENSMUST00000211587 762 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Atxn1P54254 CT025618.1-201ENSMUST00000227409 1279 ntBASIC10.61□□□□□ -0.71
Atxn1P54254 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Atxn1P54254 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms