Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox1P53783 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox1P53783 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.93□□□□□ -0.66
Sox1P53783 Ccdc173-201ENSMUST00000094942 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
Sox1P53783 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Gm42589-201ENSMUST00000199097 1751 ntBASIC10.93□□□□□ -0.66
Sox1P53783 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox1P53783 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sox1P53783 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox1P53783 Sectm1a-201ENSMUST00000026162 1692 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox1P53783 Gm24981-201ENSMUST00000104459 132 ntBASIC10.93□□□□□ -0.66
Sox1P53783 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sox1P53783 Gm9458-201ENSMUST00000135273 727 ntBASIC10.93□□□□□ -0.66
Sox1P53783 Gm18182-201ENSMUST00000191380 1251 ntBASIC10.93□□□□□ -0.66
Sox1P53783 Gm6677-201ENSMUST00000195100 441 ntBASIC10.93□□□□□ -0.66
Sox1P53783 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.93□□□□□ -0.66
Sox1P53783 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sox1P53783 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
Sox1P53783 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox1P53783 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.92□□□□□ -0.66
Sox1P53783 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox1P53783 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Gm12813-201ENSMUST00000119615 902 ntBASIC10.92□□□□□ -0.66
Sox1P53783 Gm14983-201ENSMUST00000121551 323 ntBASIC10.92□□□□□ -0.66
Sox1P53783 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Lsm5-201ENSMUST00000170382 494 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC10.92□□□□□ -0.66
Sox1P53783 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox1P53783 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC10.92□□□□□ -0.66
Sox1P53783 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 AC159899.1-201ENSMUST00000214024 733 ntBASIC10.92□□□□□ -0.66
Sox1P53783 Arl15-202ENSMUST00000224068 1002 ntBASIC10.92□□□□□ -0.66
Sox1P53783 AC161172.1-201ENSMUST00000227801 486 ntBASIC10.92□□□□□ -0.66
Sox1P53783 Figla-201ENSMUST00000032070 759 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.92□□□□□ -0.66
Sox1P53783 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox1P53783 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.92□□□□□ -0.66
Sox1P53783 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.92□□□□□ -0.66
Sox1P53783 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox1P53783 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Sox1P53783 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Sox1P53783 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.91□□□□□ -0.66
Sox1P53783 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox1P53783 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Gm4865-201ENSMUST00000196284 1309 ntBASIC10.91□□□□□ -0.66
Sox1P53783 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox1P53783 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox1P53783 Pdgfd-202ENSMUST00000168039 1795 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms