Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cux1P53564 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cux1P53564 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cux1P53564 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cux1P53564 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cux1P53564 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cux1P53564 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Gm42879-201ENSMUST00000198656 2214 ntBASIC16.07■□□□□ 0.16
Cux1P53564 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cux1P53564 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC16.07■□□□□ 0.16
Cux1P53564 Gm34780-201ENSMUST00000193896 949 ntBASIC16.07■□□□□ 0.16
Cux1P53564 Gm43833-201ENSMUST00000198828 293 ntBASIC16.07■□□□□ 0.16
Cux1P53564 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
Cux1P53564 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC16.07■□□□□ 0.16
Cux1P53564 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC16.07■□□□□ 0.16
Cux1P53564 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC16.07■□□□□ 0.16
Cux1P53564 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC16.07■□□□□ 0.16
Cux1P53564 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC16.07■□□□□ 0.16
Cux1P53564 Gm11231-201ENSMUST00000117895 1706 ntBASIC16.07■□□□□ 0.16
Cux1P53564 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cux1P53564 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cux1P53564 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Cux1P53564 Gm11493-201ENSMUST00000134567 566 ntTSL 3 BASIC16.06■□□□□ 0.16
Cux1P53564 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC16.06■□□□□ 0.16
Cux1P53564 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Gm15351-202ENSMUST00000150686 271 ntTSL 3 BASIC16.06■□□□□ 0.16
Cux1P53564 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Gm9075-201ENSMUST00000168738 794 ntBASIC16.06■□□□□ 0.16
Cux1P53564 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Gm42764-201ENSMUST00000197835 741 ntTSL 5 BASIC16.06■□□□□ 0.16
Cux1P53564 4930500F04Rik-203ENSMUST00000202177 576 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC16.06■□□□□ 0.16
Cux1P53564 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Slc51b-201ENSMUST00000065894 709 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cux1P53564 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 AC132833.1-202ENSMUST00000228875 1690 ntBASIC16.06■□□□□ 0.16
Cux1P53564 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cux1P53564 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cux1P53564 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Wfdc16-201ENSMUST00000109336 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Gm5054-201ENSMUST00000119351 453 ntBASIC16.05■□□□□ 0.16
Cux1P53564 Gm15798-201ENSMUST00000120082 408 ntBASIC16.05■□□□□ 0.16
Cux1P53564 Gemin7-205ENSMUST00000122127 652 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Cux1P53564 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC16.05■□□□□ 0.16
Cux1P53564 Fam162b-201ENSMUST00000020064 646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Gm5194-201ENSMUST00000221457 742 ntBASIC16.05■□□□□ 0.16
Cux1P53564 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Cux1P53564 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cux1P53564 Gm9260-201ENSMUST00000199781 1380 ntBASIC16.05■□□□□ 0.16
Cux1P53564 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cux1P53564 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC16.05■□□□□ 0.16
Cux1P53564 Gm16131-201ENSMUST00000131007 659 ntTSL 3 BASIC16.04■□□□□ 0.16
Cux1P53564 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cux1P53564 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC16.04■□□□□ 0.16
Cux1P53564 H2afy3-201ENSMUST00000151919 1112 ntBASIC16.04■□□□□ 0.16
Cux1P53564 Gm26483-201ENSMUST00000158016 104 ntBASIC16.04■□□□□ 0.16
Cux1P53564 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC16.04■□□□□ 0.16
Cux1P53564 H2-DMb2-202ENSMUST00000171231 1483 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cux1P53564 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cux1P53564 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cux1P53564 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cux1P53564 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cux1P53564 Gm37031-201ENSMUST00000195487 2530 ntBASIC16.04■□□□□ 0.16
Cux1P53564 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cux1P53564 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms