Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Upk2P38575 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC9.28□□□□□ -0.92
Upk2P38575 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Upk2P38575 Gm12208-201ENSMUST00000122004 163 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Gm14665-201ENSMUST00000122294 557 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Gm24514-201ENSMUST00000174961 285 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC9.28□□□□□ -0.92
Upk2P38575 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
Upk2P38575 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC9.28□□□□□ -0.92
Upk2P38575 Gm37020-201ENSMUST00000195303 992 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Gm3786-201ENSMUST00000202659 378 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.28□□□□□ -0.92
Upk2P38575 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.28□□□□□ -0.92
Upk2P38575 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC9.28□□□□□ -0.92
Upk2P38575 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.28□□□□□ -0.92
Upk2P38575 Gm9487-201ENSMUST00000216600 472 ntBASIC9.28□□□□□ -0.92
Upk2P38575 AC134601.2-201ENSMUST00000221071 130 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Gm26670-202ENSMUST00000226862 340 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.28□□□□□ -0.92
Upk2P38575 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Upk2P38575 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Upk2P38575 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.92
Upk2P38575 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Upk2P38575 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Upk2P38575 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Upk2P38575 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Upk2P38575 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Upk2P38575 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Upk2P38575 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Gm8216-201ENSMUST00000117232 601 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Upk2P38575 Gm12489-201ENSMUST00000119364 148 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC9.27□□□□□ -0.93
Upk2P38575 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Upk2P38575 Gm24248-201ENSMUST00000157321 322 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Gm26208-201ENSMUST00000158677 124 ntBASIC9.27□□□□□ -0.93
Upk2P38575 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC9.27□□□□□ -0.93
Upk2P38575 Gm24809-201ENSMUST00000175318 271 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC9.27□□□□□ -0.93
Upk2P38575 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 Gm8022-201ENSMUST00000191763 904 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Gm9116-201ENSMUST00000192400 1018 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Gm44498-201ENSMUST00000199509 111 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Gm20186-201ENSMUST00000201775 737 ntTSL 3 BASIC9.27□□□□□ -0.93
Upk2P38575 Gm44545-201ENSMUST00000208262 746 ntBASIC9.27□□□□□ -0.93
Upk2P38575 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.27□□□□□ -0.93
Upk2P38575 AC157650.1-201ENSMUST00000224582 610 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Gm8181-201ENSMUST00000062242 669 ntBASIC9.27□□□□□ -0.93
Upk2P38575 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Upk2P38575 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Upk2P38575 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Upk2P38575 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms