Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Slc1a6O35544 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.41□□□□□ -0.74
Slc1a6O35544 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.41□□□□□ -0.74
Slc1a6O35544 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Slc1a6O35544 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.41□□□□□ -0.74
Slc1a6O35544 Eno2-202ENSMUST00000112476 2386 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc1a6O35544 C030014I23Rik-204ENSMUST00000217463 1370 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.4□□□□□ -0.74
Slc1a6O35544 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.4□□□□□ -0.74
Slc1a6O35544 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.4□□□□□ -0.74
Slc1a6O35544 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.4□□□□□ -0.74
Slc1a6O35544 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Gm37860-201ENSMUST00000195380 1034 ntBASIC10.4□□□□□ -0.74
Slc1a6O35544 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.4□□□□□ -0.74
Slc1a6O35544 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Slc1a6O35544 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Slc1a6O35544 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc1a6O35544 Ptgr2-201ENSMUST00000123614 3168 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc1a6O35544 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc1a6O35544 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc1a6O35544 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Slc1a6O35544 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.75
Slc1a6O35544 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Slc1a6O35544 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Gm38413-202ENSMUST00000198449 2348 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Cpsf3-211ENSMUST00000222968 1858 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
Slc1a6O35544 AC154575.1-201ENSMUST00000227166 1474 ntBASIC10.39□□□□□ -0.75
Slc1a6O35544 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Gm13045-201ENSMUST00000119019 712 ntBASIC10.39□□□□□ -0.75
Slc1a6O35544 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Gm37458-201ENSMUST00000194055 410 ntBASIC10.39□□□□□ -0.75
Slc1a6O35544 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Sh3glb1-204ENSMUST00000199531 2584 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Slc1a6O35544 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Gm8684-201ENSMUST00000195078 1564 ntBASIC10.39□□□□□ -0.75
Slc1a6O35544 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Slc1a6O35544 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms