Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Olfr1051-201ENSMUST00000099898 927 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkx1-1G3UXB3 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm22495-201ENSMUST00000104492 126 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Rps18-ps1-201ENSMUST00000120838 459 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Vmn1r-ps113-201ENSMUST00000121318 1106 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm11736-201ENSMUST00000121468 505 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm23867-201ENSMUST00000122649 274 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 4833417C18Rik-201ENSMUST00000146868 1269 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm24065-201ENSMUST00000157487 264 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm23081-201ENSMUST00000157845 297 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm20395-201ENSMUST00000173799 690 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm4705-201ENSMUST00000177415 354 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm27864-201ENSMUST00000183704 190 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm38041-201ENSMUST00000194445 661 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm31520-201ENSMUST00000203048 733 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm5317-201ENSMUST00000204445 847 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 AC153569.1-201ENSMUST00000215873 807 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Mrps36-ps1-201ENSMUST00000061311 306 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Gm15519-201ENSMUST00000120088 1566 ntBASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkx1-1G3UXB3 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 AC120153.1-201ENSMUST00000226502 1311 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm23129-201ENSMUST00000104259 132 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Mir1190-201ENSMUST00000116925 96 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm13422-201ENSMUST00000118834 504 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm14497-201ENSMUST00000119537 580 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm13711-201ENSMUST00000119708 453 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC13.39□□□□□ -0.27
Nkx1-1G3UXB3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms