Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm22119-201ENSMUST00000175594 99 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm18367-201ENSMUST00000176139 600 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm9723-201ENSMUST00000192100 457 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm43852-201ENSMUST00000202098 917 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm35638-201ENSMUST00000220724 652 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Mettl6-204ENSMUST00000227595 1027 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm43915-201ENSMUST00000203013 5037 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Boc-201ENSMUST00000114634 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Ccdc136-202ENSMUST00000115275 3279 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Ncapg2-201ENSMUST00000084828 4684 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.85□□□□□ -0.83
Trim13Q9CYB0 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC9.85□□□□□ -0.83
Trim13Q9CYB0 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm21817-201ENSMUST00000178584 2583 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Mfn2-201ENSMUST00000030884 4341 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm15615-201ENSMUST00000118876 198 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Mir5120-201ENSMUST00000175020 78 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Mipep-ps-201ENSMUST00000177439 291 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm37981-201ENSMUST00000194280 535 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 AC132881.2-201ENSMUST00000225474 709 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Myo1c-202ENSMUST00000102504 4659 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm21142-201ENSMUST00000179999 2604 ntBASIC9.84□□□□□ -0.83
Trim13Q9CYB0 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.84□□□□□ -0.84
Trim13Q9CYB0 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
Trim13Q9CYB0 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms