Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm22146-201ENSMUST00000157397 288 ntBASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Mipep-ps-201ENSMUST00000177439 291 ntBASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm28032-201ENSMUST00000184104 96 ntBASIC10.31□□□□□ -0.76
Otud1Q9CUB6 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm7684-201ENSMUST00000211891 829 ntBASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm18042-201ENSMUST00000219887 790 ntBASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 CT010480.2-201ENSMUST00000225424 737 ntBASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm7589-201ENSMUST00000085631 534 ntBASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.31□□□□□ -0.76
Otud1Q9CUB6 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm26119-201ENSMUST00000175601 104 ntBASIC10.3□□□□□ -0.76
Otud1Q9CUB6 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm9162-201ENSMUST00000182081 991 ntBASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm34379-201ENSMUST00000195036 290 ntBASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm6677-201ENSMUST00000195100 441 ntBASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm43491-201ENSMUST00000197133 784 ntBASIC10.3□□□□□ -0.76
Otud1Q9CUB6 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm44559-201ENSMUST00000207177 1012 ntBASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC10.3□□□□□ -0.76
Otud1Q9CUB6 AC159886.1-201ENSMUST00000217099 1091 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms