Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Mir453-201ENSMUST00000104732 82 ntBASIC11.19□□□□□ -0.62
Usp11Q99K46 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm25072-201ENSMUST00000175233 235 ntBASIC11.19□□□□□ -0.62
Usp11Q99K46 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Platr10-202ENSMUST00000191479 818 ntBASIC11.19□□□□□ -0.62
Usp11Q99K46 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.19□□□□□ -0.62
Usp11Q99K46 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.19□□□□□ -0.62
Usp11Q99K46 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.19□□□□□ -0.62
Usp11Q99K46 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.19□□□□□ -0.62
Usp11Q99K46 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Usp11Q99K46 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Usp11Q99K46 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Rims2-204ENSMUST00000226410 3685 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm45191-201ENSMUST00000205846 5439 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Snord23-201ENSMUST00000116828 109 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm11952-201ENSMUST00000121172 821 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm32111-201ENSMUST00000207689 846 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.18□□□□□ -0.62
Usp11Q99K46 CT025645.2-201ENSMUST00000223278 3827 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Usp11Q99K46 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Usp11Q99K46 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm8320-201ENSMUST00000177584 1762 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm8303-201ENSMUST00000178371 1762 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Gm8331-201ENSMUST00000178433 1762 ntBASIC11.18□□□□□ -0.62
Usp11Q99K46 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Usp11Q99K46 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Usp11Q99K46 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.17□□□□□ -0.62
Usp11Q99K46 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Usp11Q99K46 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Usp11Q99K46 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms