Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm12397-201ENSMUST00000117674 615 ntBASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm5274-201ENSMUST00000182641 1003 ntBASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm42803-201ENSMUST00000201051 451 ntBASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm18010-201ENSMUST00000203553 202 ntBASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Atf7-201ENSMUST00000096143 390 ntBASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Prpf31Q8CCF0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Gm12943-201ENSMUST00000119616 210 ntBASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Gm7539-201ENSMUST00000189789 630 ntBASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Prpf31Q8CCF0 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.65□□□□□ -0.55
Prpf31Q8CCF0 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Prpf31Q8CCF0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Prpf31Q8CCF0 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Prpf31Q8CCF0 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Prpf31Q8CCF0 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Prpf31Q8CCF0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Prpf31Q8CCF0 Gm43052-201ENSMUST00000201451 1628 ntBASIC11.64□□□□□ -0.55
Prpf31Q8CCF0 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Prpf31Q8CCF0 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Prpf31Q8CCF0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Prpf31Q8CCF0 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Prpf31Q8CCF0 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms