Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm13284-201ENSMUST00000121020 547 ntBASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm9162-201ENSMUST00000182081 991 ntBASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.43□□□□□ -0.42
Vps53Q8CCB4 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm43969-201ENSMUST00000204833 535 ntBASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm9102-201ENSMUST00000219250 465 ntBASIC12.43□□□□□ -0.42
Vps53Q8CCB4 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Acbd5-212ENSMUST00000227663 4566 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps53Q8CCB4 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm13039-201ENSMUST00000118638 794 ntBASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm25226-201ENSMUST00000158198 123 ntBASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm44814-201ENSMUST00000207018 434 ntBASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Gm4903-201ENSMUST00000210462 405 ntBASIC12.42□□□□□ -0.42
Vps53Q8CCB4 AC162932.1-201ENSMUST00000219209 872 ntBASIC12.42□□□□□ -0.42
Vps53Q8CCB4 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Vps53Q8CCB4 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Vps53Q8CCB4 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms