Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm7583-201ENSMUST00000182941 1005 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm28916-201ENSMUST00000186988 699 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm38349-201ENSMUST00000195732 462 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm5870-201ENSMUST00000196461 282 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm2448-201ENSMUST00000207080 559 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm6426-201ENSMUST00000209048 854 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Gm38034-201ENSMUST00000193915 2069 ntBASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Alx1Q8C8B0 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Snora68-201ENSMUST00000104375 131 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Gm5257-201ENSMUST00000121823 790 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Gm18010-201ENSMUST00000203553 202 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Gm6794-201ENSMUST00000203829 457 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Gm18204-201ENSMUST00000209835 793 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Gm6564-201ENSMUST00000075377 619 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Alx1Q8C8B0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Alx1Q8C8B0 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms