Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim9Q8C7M3 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm32914-201ENSMUST00000203815 2228 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Mir291b-201ENSMUST00000104838 79 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm12397-201ENSMUST00000117674 615 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm23647-201ENSMUST00000175042 109 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Rn5s-201ENSMUST00000177555 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm22109-201ENSMUST00000177995 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm22291-201ENSMUST00000178027 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm23284-201ENSMUST00000178069 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm25018-201ENSMUST00000179081 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm25212-201ENSMUST00000179432 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm26391-201ENSMUST00000179843 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm8625-201ENSMUST00000194185 1077 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm37028-201ENSMUST00000194276 107 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm43249-201ENSMUST00000200464 458 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 AC161172.1-201ENSMUST00000227801 486 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm24089-201ENSMUST00000093696 109 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm13169-201ENSMUST00000122090 1459 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Gm45170-201ENSMUST00000206746 1671 ntBASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim9Q8C7M3 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Zfp42-201ENSMUST00000082120 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm12489-201ENSMUST00000119364 148 ntBASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm14234-201ENSMUST00000119539 845 ntBASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.67□□□□□ -0.54
Trim9Q8C7M3 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms