Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim43aQ3TL54 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm37975-201ENSMUST00000195494 2099 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Ints6l-201ENSMUST00000039374 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm11949-201ENSMUST00000117640 372 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm16166-201ENSMUST00000118291 787 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm14942-201ENSMUST00000119642 336 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm22442-201ENSMUST00000157256 144 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm22138-201ENSMUST00000158748 128 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm23771-201ENSMUST00000178702 110 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Mir7076-201ENSMUST00000183519 74 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm44545-201ENSMUST00000208262 746 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm8162-201ENSMUST00000213951 665 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Ggct-202ENSMUST00000131475 3960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Gm37003-201ENSMUST00000194702 2827 ntBASIC11.25□□□□□ -0.61
Trim43aQ3TL54 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim43aQ3TL54 Odf2-205ENSMUST00000113757 3082 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Prdx6-202ENSMUST00000071718 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.24□□□□□ -0.61
Trim43aQ3TL54 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Gm43671-201ENSMUST00000200422 433 ntBASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Gm44980-201ENSMUST00000205826 314 ntBASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 AC154431.1-201ENSMUST00000224910 880 ntBASIC11.24□□□□□ -0.61
Trim43aQ3TL54 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Gm37057-201ENSMUST00000192624 1916 ntBASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim43aQ3TL54 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trim43aQ3TL54 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms