Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm42444-201ENSMUST00000199366 4558 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Rps4l-202ENSMUST00000204242 789 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm20274-201ENSMUST00000206967 584 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm45310-201ENSMUST00000210436 275 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm35618-201ENSMUST00000223164 1606 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 AC132863.2-201ENSMUST00000226643 799 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 AC130671.3-201ENSMUST00000227393 1897 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm25125-201ENSMUST00000083340 136 ntBASIC8.67□□□□□ -1.02
Trim63Q38HM4 Acsl6-205ENSMUST00000094194 2554 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Ces2b-201ENSMUST00000059449 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Gm30373-202ENSMUST00000217507 2709 ntTSL 5 BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Trim63Q38HM4 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Zfp61-201ENSMUST00000077780 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Cd200-202ENSMUST00000163230 2347 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Pot1a-209ENSMUST00000166445 1923 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm44037-201ENSMUST00000204816 1891 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Mylk3-201ENSMUST00000034133 3696 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 AL662807.2-201ENSMUST00000224024 3335 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Btg4-201ENSMUST00000114431 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Usp7-208ENSMUST00000161046 4003 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Arpp19-209ENSMUST00000169492 3963 ntTSL 2 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Lyrm7os-201ENSMUST00000154044 928 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm17794-201ENSMUST00000220252 955 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm9996-201ENSMUST00000070359 913 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm26782-201ENSMUST00000181482 2513 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm28447-202ENSMUST00000186677 2230 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 AC126459.1-201ENSMUST00000214791 2123 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Slc35f6-201ENSMUST00000062962 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm44437-201ENSMUST00000203832 4038 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Epb41l3-201ENSMUST00000080208 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Itgb6-201ENSMUST00000028348 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm7353-201ENSMUST00000069044 2866 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Gm6768-201ENSMUST00000022467 1878 ntBASIC8.66□□□□□ -1.02
Trim63Q38HM4 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Ints10-204ENSMUST00000110242 4250 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Trim63Q38HM4 Wdhd1-202ENSMUST00000111792 4174 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms