Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm16209-201ENSMUST00000118457 627 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm6441-201ENSMUST00000120983 696 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm10171-201ENSMUST00000126220 628 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm25116-201ENSMUST00000157191 122 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm2345-201ENSMUST00000193451 589 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm45481-201ENSMUST00000209717 877 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Ebf1Q07802 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm10233-201ENSMUST00000089275 628 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Rims2-204ENSMUST00000226410 3685 ntBASIC10.85□□□□□ -0.67
Ebf1Q07802 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ebf1Q07802 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ebf1Q07802 Rgr-203ENSMUST00000225070 4704 ntBASIC10.84□□□□□ -0.67
Ebf1Q07802 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm23604-201ENSMUST00000104311 132 ntBASIC10.84□□□□□ -0.67
Ebf1Q07802 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.84□□□□□ -0.67
Ebf1Q07802 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.84□□□□□ -0.67
Ebf1Q07802 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ebf1Q07802 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.84□□□□□ -0.67
Ebf1Q07802 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Rps3a3-201ENSMUST00000074680 795 ntBASIC10.84□□□□□ -0.67
Ebf1Q07802 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Ebf1Q07802 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC10.84□□□□□ -0.67
Ebf1Q07802 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Ebf1Q07802 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms