Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC13.35□□□□□ -0.27
Smarcc1P97496 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Gm29157-201ENSMUST00000188753 612 ntBASIC13.35□□□□□ -0.27
Smarcc1P97496 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Gm5174-201ENSMUST00000171131 1423 ntBASIC13.35□□□□□ -0.27
Smarcc1P97496 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Smarcc1P97496 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.35□□□□□ -0.27
Smarcc1P97496 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Smarcc1P97496 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Smarcc1P97496 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Smarcc1P97496 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Gm24161-201ENSMUST00000104592 130 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Smarcc1P97496 Mir1190-201ENSMUST00000116925 96 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 Gm13215-201ENSMUST00000117559 472 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC13.34□□□□□ -0.27
Smarcc1P97496 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Gm44173-201ENSMUST00000204316 132 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 Gm18391-201ENSMUST00000217189 658 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 Gm8960-201ENSMUST00000219787 788 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 CT025642.1-201ENSMUST00000224734 1219 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 AC166061.1-201ENSMUST00000225163 1138 ntBASIC13.34□□□□□ -0.27
Smarcc1P97496 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcc1P97496 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Smarcc1P97496 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Smarcc1P97496 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.34□□□□□ -0.27
Smarcc1P97496 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smarcc1P97496 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcc1P97496 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcc1P97496 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smarcc1P97496 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm45110-201ENSMUST00000205704 1402 ntBASIC13.33□□□□□ -0.28
Smarcc1P97496 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm25561-201ENSMUST00000104607 125 ntBASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm23999-201ENSMUST00000158057 104 ntBASIC13.33□□□□□ -0.28
Smarcc1P97496 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm45363-201ENSMUST00000210196 1294 ntBASIC13.33□□□□□ -0.28
Smarcc1P97496 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm6768-201ENSMUST00000022467 1878 ntBASIC13.33□□□□□ -0.28
Smarcc1P97496 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smarcc1P97496 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm6727-201ENSMUST00000204102 1518 ntBASIC13.33□□□□□ -0.28
Smarcc1P97496 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Smarcc1P97496 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms