Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SgcbP82349 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
SgcbP82349 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.61□□□□□ -0.87
SgcbP82349 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SgcbP82349 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
SgcbP82349 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
SgcbP82349 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Gm8684-201ENSMUST00000195078 1564 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
SgcbP82349 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Trpm5-201ENSMUST00000009390 4123 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SgcbP82349 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
SgcbP82349 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Gm22146-201ENSMUST00000157397 288 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.6□□□□□ -0.87
SgcbP82349 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.6□□□□□ -0.87
SgcbP82349 Gm19587-201ENSMUST00000191395 545 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Gm37852-201ENSMUST00000193027 350 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Gm20177-201ENSMUST00000203705 334 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Gm4903-201ENSMUST00000210462 405 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC9.6□□□□□ -0.87
SgcbP82349 AC153968.2-201ENSMUST00000215579 1140 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 CT025551.1-201ENSMUST00000223996 692 ntBASIC9.6□□□□□ -0.87
SgcbP82349 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.6□□□□□ -0.87
SgcbP82349 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Gm37058-201ENSMUST00000193393 1644 ntBASIC9.6□□□□□ -0.87
SgcbP82349 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
SgcbP82349 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
SgcbP82349 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
SgcbP82349 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.59□□□□□ -0.87
SgcbP82349 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Gm37048-201ENSMUST00000194827 5578 ntBASIC9.59□□□□□ -0.87
SgcbP82349 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SgcbP82349 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SgcbP82349 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
SgcbP82349 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.59□□□□□ -0.87
SgcbP82349 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Gm24791-201ENSMUST00000104284 131 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
SgcbP82349 Gm14481-201ENSMUST00000117178 629 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Gm6758-201ENSMUST00000119643 1055 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Gm12990-201ENSMUST00000120372 468 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC9.59□□□□□ -0.87
SgcbP82349 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC9.59□□□□□ -0.87
SgcbP82349 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC9.59□□□□□ -0.87
SgcbP82349 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
SgcbP82349 Gm8723-201ENSMUST00000166076 820 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.59□□□□□ -0.87
SgcbP82349 Gm8701-201ENSMUST00000169259 874 ntBASIC9.59□□□□□ -0.87
SgcbP82349 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Gm17983-201ENSMUST00000190766 594 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Gm31274-201ENSMUST00000197356 229 ntBASIC9.59□□□□□ -0.87
SgcbP82349 Gm40414-201ENSMUST00000197608 481 ntBASIC9.59□□□□□ -0.87
SgcbP82349 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
SgcbP82349 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC9.59□□□□□ -0.87
SgcbP82349 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SgcbP82349 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms