Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm6238-201ENSMUST00000120999 465 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Gm15258-201ENSMUST00000153801 741 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Atxn1P54254 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Gm38145-201ENSMUST00000192319 693 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.64□□□□□ -0.71
Atxn1P54254 Gm7880-201ENSMUST00000203748 871 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Gm45258-201ENSMUST00000210042 853 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Gm6859-201ENSMUST00000218614 989 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Gm3926-201ENSMUST00000223378 1123 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Atxn1P54254 Gm17541-201ENSMUST00000080062 525 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Gm23458-201ENSMUST00000083257 169 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.64□□□□□ -0.71
Atxn1P54254 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Atxn1P54254 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.64□□□□□ -0.71
Atxn1P54254 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
Atxn1P54254 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.64□□□□□ -0.71
Atxn1P54254 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.64□□□□□ -0.71
Atxn1P54254 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Atxn1P54254 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.64□□□□□ -0.71
Atxn1P54254 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Atxn1P54254 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
Atxn1P54254 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Atxn1P54254 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.63□□□□□ -0.71
Atxn1P54254 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Gm23129-201ENSMUST00000104259 132 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.63□□□□□ -0.71
Atxn1P54254 Gm13777-201ENSMUST00000118208 345 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Atxn1P54254 Olfml3-204ENSMUST00000169286 874 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Gm18555-201ENSMUST00000197935 584 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Gm5291-201ENSMUST00000201965 899 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC10.63□□□□□ -0.71
Atxn1P54254 AC164614.1-201ENSMUST00000216038 397 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Atxn1P54254 AC153153.1-201ENSMUST00000225803 793 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 AC133517.1-201ENSMUST00000225825 594 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 AC159006.3-201ENSMUST00000226918 664 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 CT571271.1-201ENSMUST00000227071 670 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Atxn1P54254 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Gm16477-201ENSMUST00000085365 801 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Atxn1P54254 Gm17415-201ENSMUST00000096427 789 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Atxn1P54254 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.63□□□□□ -0.71
Atxn1P54254 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Atxn1P54254 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Atxn1P54254 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
Atxn1P54254 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Atxn1P54254 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Atxn1P54254 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms