Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col8a2P25318 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Gm22582-201ENSMUST00000102283 94 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Gm13827-201ENSMUST00000148801 372 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Gm43547-201ENSMUST00000197729 328 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC8.87□□□□□ -0.99
Col8a2P25318 Gm42689-201ENSMUST00000202403 404 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 Wbp1-209ENSMUST00000205023 716 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC8.87□□□□□ -0.99
Col8a2P25318 Gm45135-201ENSMUST00000206787 1184 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC8.87□□□□□ -0.99
Col8a2P25318 Gm18001-201ENSMUST00000212023 688 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 CT025689.1-201ENSMUST00000225214 283 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Col8a2P25318 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Col8a2P25318 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col8a2P25318 Gm5434-202ENSMUST00000222384 1451 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 Gm5434-201ENSMUST00000071825 1451 ntBASIC8.87□□□□□ -0.99
Col8a2P25318 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Col8a2P25318 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Col8a2P25318 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Col8a2P25318 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col8a2P25318 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC8.86□□□□□ -0.99
Col8a2P25318 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Col8a2P25318 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col8a2P25318 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Gm45501-201ENSMUST00000211468 2526 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC8.86□□□□□ -0.99
Col8a2P25318 Mir671-201ENSMUST00000102432 98 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Gm14274-201ENSMUST00000117182 615 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Gm6441-201ENSMUST00000120983 696 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC8.86□□□□□ -0.99
Col8a2P25318 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Gm25872-201ENSMUST00000177784 100 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC8.86□□□□□ -0.99
Col8a2P25318 Gm37141-201ENSMUST00000191938 422 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Gm38321-201ENSMUST00000195053 235 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC8.86□□□□□ -0.99
Col8a2P25318 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Gm18466-201ENSMUST00000209147 499 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC8.86□□□□□ -0.99
Col8a2P25318 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC8.86□□□□□ -0.99
Col8a2P25318 CT030652.1-201ENSMUST00000227377 1235 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 AC142266.1-201ENSMUST00000228107 415 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 AC137871.1-201ENSMUST00000228278 475 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Gm38292-201ENSMUST00000192646 3045 ntBASIC8.86□□□□□ -0.99
Col8a2P25318 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Col8a2P25318 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Col8a2P25318 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC8.86□□□□□ -0.99
Col8a2P25318 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Col8a2P25318 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Col8a2P25318 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Col8a2P25318 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 AC124577.2-201ENSMUST00000217413 2420 ntBASIC8.85□□□□□ -0.99
Col8a2P25318 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Col8a2P25318 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms