Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 AC107711.4-201ENSMUST00000228948 440 ntBASIC11.02□□□□□ -0.65
Hoxb3P09026 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hoxb3P09026 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Gm26132-201ENSMUST00000083166 148 ntBASIC11.02□□□□□ -0.65
Hoxb3P09026 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Gm6478-201ENSMUST00000099450 742 ntBASIC11.02□□□□□ -0.65
Hoxb3P09026 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Hoxb3P09026 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Hoxb3P09026 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.02□□□□□ -0.65
Hoxb3P09026 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Hoxb3P09026 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.02□□□□□ -0.65
Hoxb3P09026 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hoxb3P09026 Gm42462-201ENSMUST00000196543 1363 ntBASIC11.02□□□□□ -0.65
Hoxb3P09026 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Mettl18-202ENSMUST00000111490 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Snord23-201ENSMUST00000116828 109 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm16209-201ENSMUST00000118457 627 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm10171-201ENSMUST00000126220 628 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Cfhr3-201ENSMUST00000170441 1022 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Clec4n-206ENSMUST00000205129 363 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm9102-201ENSMUST00000219250 465 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
Hoxb3P09026 AC154843.1-201ENSMUST00000226897 1138 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm10254-201ENSMUST00000052888 867 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm5471-201ENSMUST00000072732 337 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Gm10233-201ENSMUST00000089275 628 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Btrc-209ENSMUST00000224478 2194 ntBASIC11.01□□□□□ -0.65
Hoxb3P09026 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.01□□□□□ -0.65
Hoxb3P09026 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hoxb3P09026 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxb3P09026 Gm43127-201ENSMUST00000195890 2789 ntBASIC11□□□□□ -0.65
Hoxb3P09026 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxb3P09026 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxb3P09026 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hoxb3P09026 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxb3P09026 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxb3P09026 Gm43727-201ENSMUST00000198021 2647 ntBASIC11□□□□□ -0.65
Hoxb3P09026 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxb3P09026 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hoxb3P09026 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hoxb3P09026 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC11□□□□□ -0.65
Hoxb3P09026 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11□□□□□ -0.65
Hoxb3P09026 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Hoxb3P09026 Gm25507-201ENSMUST00000116981 144 ntBASIC11□□□□□ -0.65
Hoxb3P09026 Gm14854-201ENSMUST00000117758 841 ntBASIC11□□□□□ -0.65
Hoxb3P09026 Gm15636-201ENSMUST00000119205 668 ntBASIC11□□□□□ -0.65
Hoxb3P09026 Gm3828-201ENSMUST00000121817 257 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms